python for data analysis: data wrangling with pandas, numpy, and jupyter Search Results


octet  (Sartorius AG)
99
Sartorius AG octet
Octet, supplied by Sartorius AG, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/custom%40octet%4010%2E1016%2Fj%2Eisci%2E2026%2E115849?v=Sartorius+AG
Average 99 stars, based on 1 article reviews
octet - by Bioz Stars, 2026-07
99/100 stars
  Buy from Supplier
jupyter notebooks  (Kaggle Inc)
86
Kaggle Inc jupyter notebooks
Jupyter Notebooks, supplied by Kaggle Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pmc12482779-240-0-4?v=Kaggle+Inc
Average 86 stars, based on 1 article reviews
jupyter notebooks - by Bioz Stars, 2026-07
86/100 stars
  Buy from Supplier
jupyter notebooks  (Redivis Inc)
90
Redivis Inc jupyter notebooks
Jupyter Notebooks, supplied by Redivis Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pm38836249-192-10-1?v=Redivis+Inc
Average 90 stars, based on 1 article reviews
jupyter notebooks - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier
jupyter notebooks  (Applied Bioinformatics)
90
Applied Bioinformatics jupyter notebooks
Jupyter Notebooks, supplied by Applied Bioinformatics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pmc10696397-225-0-10?v=Applied+Bioinformatics
Average 90 stars, based on 1 article reviews
jupyter notebooks - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier
jupyter notebooks  (PanGeo Pharma Inc)
90
PanGeo Pharma Inc jupyter notebooks
Jupyter Notebooks, supplied by PanGeo Pharma Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pmc07048949-165-0-11?v=PanGeo+Pharma+Inc
Average 90 stars, based on 1 article reviews
jupyter notebooks - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier
jupyter notebook platform  (Kaggle Inc)
86
Kaggle Inc jupyter notebook platform
Jupyter Notebook Platform, supplied by Kaggle Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pmc12657511-131-12-11?v=Kaggle+Inc
Average 86 stars, based on 1 article reviews
jupyter notebook platform - by Bioz Stars, 2026-07
86/100 stars
  Buy from Supplier
r notebook  (RStudio)
90
RStudio r notebook
Overview of our approach. The author of the Bioconductor workflow uses BiocImageBuilder to generate a <t>Dockerfile</t> that describes the Bioconductor and CRAN packages installed. The Dockerfile and the notebook files are uploaded to a server or GitHub repository. A custom container is then built with the default Linux base image for Bioconductor, dependencies for Jupyter, JuptyerHub, and/or Binder, and the Bioconductor packages. For GitHub installations, the Binder server builds the container and provides a link to run the container on its public cluster. JupyterHub provides the same functionality locally or on a private server. Using the container, the end user is able to view the notebook and execute, modify, and save the code on his or her local machine regardless of whether it uses Linux, MacOS, or Windows. In the case where the container is run remotely, no additional installation of software is required on the part of the end user.
R Notebook, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pmc06381817-208-14-59?v=RStudio
Average 90 stars, based on 1 article reviews
r notebook - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier
jupyter notebooks  (Ebooks Corporation)
90
Ebooks Corporation jupyter notebooks
Overview of our approach. The author of the Bioconductor workflow uses BiocImageBuilder to generate a <t>Dockerfile</t> that describes the Bioconductor and CRAN packages installed. The Dockerfile and the notebook files are uploaded to a server or GitHub repository. A custom container is then built with the default Linux base image for Bioconductor, dependencies for Jupyter, JuptyerHub, and/or Binder, and the Bioconductor packages. For GitHub installations, the Binder server builds the container and provides a link to run the container on its public cluster. JupyterHub provides the same functionality locally or on a private server. Using the container, the end user is able to view the notebook and execute, modify, and save the code on his or her local machine regardless of whether it uses Linux, MacOS, or Windows. In the case where the container is run remotely, no additional installation of software is required on the part of the end user.
Jupyter Notebooks, supplied by Ebooks Corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pm33221420-254-12-16?v=Ebooks+Corporation
Average 90 stars, based on 1 article reviews
jupyter notebooks - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier
rstudio/rshiny  (RStudio)
90
RStudio rstudio/rshiny
Tool availability: summary representation of tools available to account holders in the Cloud Resources.
Rstudio/Rshiny, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pmc11063685-136-15-17?v=RStudio
Average 90 stars, based on 1 article reviews
rstudio/rshiny - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier
jupyter notebooks  (European XFEL GmbH)
90
European XFEL GmbH jupyter notebooks
Tool availability: summary representation of tools available to account holders in the Cloud Resources.
Jupyter Notebooks, supplied by European XFEL GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pmc10000791-258-0-5?v=European+XFEL+GmbH
Average 90 stars, based on 1 article reviews
jupyter notebooks - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier
jupyter notebooks  (BioNano Genomics)
90
BioNano Genomics jupyter notebooks
Tool availability: summary representation of tools available to account holders in the Cloud Resources.
Jupyter Notebooks, supplied by BioNano Genomics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pmc08454654-175-1-14?v=BioNano+Genomics
Average 90 stars, based on 1 article reviews
jupyter notebooks - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier
jupyter notebook  (RStudio)
90
RStudio jupyter notebook
Tool availability: summary representation of tools available to account holders in the Cloud Resources.
Jupyter Notebook, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/python+for+data+analysis%3A+data+wrangling+with+pandas%2C+numpy%2C+and+jupyter/pmc07593834-72-9-21?v=RStudio
Average 90 stars, based on 1 article reviews
jupyter notebook - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier

Image Search Results


Overview of our approach. The author of the Bioconductor workflow uses BiocImageBuilder to generate a Dockerfile that describes the Bioconductor and CRAN packages installed. The Dockerfile and the notebook files are uploaded to a server or GitHub repository. A custom container is then built with the default Linux base image for Bioconductor, dependencies for Jupyter, JuptyerHub, and/or Binder, and the Bioconductor packages. For GitHub installations, the Binder server builds the container and provides a link to run the container on its public cluster. JupyterHub provides the same functionality locally or on a private server. Using the container, the end user is able to view the notebook and execute, modify, and save the code on his or her local machine regardless of whether it uses Linux, MacOS, or Windows. In the case where the container is run remotely, no additional installation of software is required on the part of the end user.

Journal: Journal of the American Medical Informatics Association : JAMIA

Article Title: Reproducible Bioconductor workflows using browser-based interactive notebooks and containers

doi: 10.1093/jamia/ocx120

Figure Lengend Snippet: Overview of our approach. The author of the Bioconductor workflow uses BiocImageBuilder to generate a Dockerfile that describes the Bioconductor and CRAN packages installed. The Dockerfile and the notebook files are uploaded to a server or GitHub repository. A custom container is then built with the default Linux base image for Bioconductor, dependencies for Jupyter, JuptyerHub, and/or Binder, and the Bioconductor packages. For GitHub installations, the Binder server builds the container and provides a link to run the container on its public cluster. JupyterHub provides the same functionality locally or on a private server. Using the container, the end user is able to view the notebook and execute, modify, and save the code on his or her local machine regardless of whether it uses Linux, MacOS, or Windows. In the case where the container is run remotely, no additional installation of software is required on the part of the end user.

Article Snippet: Since our default option is to specify the versions of R/Bioconductor packages in the Dockerfile, reproducibility of results is ensured even between R/Bioconductor releases. table ft1 table-wrap mode="anchored" t5 Table 1. caption a7 Platform Author requirements Reader requirements R/Bioconductor Multi-user share Jupyter Python, Jupyter Python, Jupyter No No Jupyter/IRkernel Python, Jupyter, IRkernel Python, Jupyter, IRkernel Yes No R Notebook Rstudio Rstudio Yes No JupyterHub Docker server, Dockerfile Browser Yes Yes Binder GitHub repository, Dockerfile Browser Yes Yes Open in a separate window Comparison of different options to install and use data science notebooks.

Techniques: Software

Comparison of different options to install and use data science notebooks.

Journal: Journal of the American Medical Informatics Association : JAMIA

Article Title: Reproducible Bioconductor workflows using browser-based interactive notebooks and containers

doi: 10.1093/jamia/ocx120

Figure Lengend Snippet: Comparison of different options to install and use data science notebooks.

Article Snippet: Since our default option is to specify the versions of R/Bioconductor packages in the Dockerfile, reproducibility of results is ensured even between R/Bioconductor releases. table ft1 table-wrap mode="anchored" t5 Table 1. caption a7 Platform Author requirements Reader requirements R/Bioconductor Multi-user share Jupyter Python, Jupyter Python, Jupyter No No Jupyter/IRkernel Python, Jupyter, IRkernel Python, Jupyter, IRkernel Yes No R Notebook Rstudio Rstudio Yes No JupyterHub Docker server, Dockerfile Browser Yes Yes Binder GitHub repository, Dockerfile Browser Yes Yes Open in a separate window Comparison of different options to install and use data science notebooks.

Techniques: Comparison

Screenshot of BiocImageBuilder. The user selects from a menu the Bioconductor and CRAN packages required for his or her notebook. BiocImageBuilder then generates the Dockerfile describing a minimal Linux container that contains these packages. The Dockerfile can be uploaded to GitHub, where it can be viewed interactively using Binder.

Journal: Journal of the American Medical Informatics Association : JAMIA

Article Title: Reproducible Bioconductor workflows using browser-based interactive notebooks and containers

doi: 10.1093/jamia/ocx120

Figure Lengend Snippet: Screenshot of BiocImageBuilder. The user selects from a menu the Bioconductor and CRAN packages required for his or her notebook. BiocImageBuilder then generates the Dockerfile describing a minimal Linux container that contains these packages. The Dockerfile can be uploaded to GitHub, where it can be viewed interactively using Binder.

Article Snippet: Since our default option is to specify the versions of R/Bioconductor packages in the Dockerfile, reproducibility of results is ensured even between R/Bioconductor releases. table ft1 table-wrap mode="anchored" t5 Table 1. caption a7 Platform Author requirements Reader requirements R/Bioconductor Multi-user share Jupyter Python, Jupyter Python, Jupyter No No Jupyter/IRkernel Python, Jupyter, IRkernel Python, Jupyter, IRkernel Yes No R Notebook Rstudio Rstudio Yes No JupyterHub Docker server, Dockerfile Browser Yes Yes Binder GitHub repository, Dockerfile Browser Yes Yes Open in a separate window Comparison of different options to install and use data science notebooks.

Techniques:

Tool availability: summary representation of tools available to account holders in the Cloud Resources.

Journal: Cancer Research

Article Title: NCI Cancer Research Data Commons: Cloud-Based Analytic Resources

doi: 10.1158/0008-5472.CAN-23-2657

Figure Lengend Snippet: Tool availability: summary representation of tools available to account holders in the Cloud Resources.

Article Snippet: Many of the commonly used tools within the bioinformatics community are provided, including BigQuery, Galaxy, Jupyter notebooks, RStudio/RShiny, and SAS.

Techniques: Variant Assay, Derivative Assay, Imaging